Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931746.1_cds_XP_016478464.1_70100
CDS Infomation

[gene=LOC107799834] [db_xref=GeneID:107799834] [protein=E3 ubiquitin-protein ligase At4g11680-like] [protein_id=XP_016478464.1] [location=join(30062..30618,31211..31330,31410..31542,36366..36530,36636..36812)] [gbkey=CDS]
Sequence

ATGTCGACGGCGAGAGCCGGTAACGATGACAGTTCTAACAGAGTTGATACGACGCCGTTG
CTCACCGATCAGCTCTTTAGGAGCCGACGGTTAGCGCGCCGTGCCCCGAGCCTAAGAGGA
GCGGCTCGATTTCTCCGGCGAGCAAGTAGCCGGCGAATGATGCGAGAGCCGTCGAGGCGC
GTGAGGGAAGCTGCAGCGGAGCAAATCGAGGAACGGCAGAGCGATTGGGCGTACTCTAAA
CCTATAGTGATACTGGATCTTATCTGGAACTTAGCTTTCGTGATTGTCTCAGTTTCTGTG
TTGATTTTGAGCCTTGACGAGTCACCTTCTATGCCATTGAGGCTTTGGATTGTTGGATAC
GCTTTACAGTGTTTGCTTCACATGGTTTGTGTTTGCGTTGAGTATAGACGCCGAATTCAG
CTTAGTAATCCTGCTACAAGTTTGAATTCTGAGCAGAGTAGCGTTGCTGGAGGTTGGAAC
GGTTCAAGTTCGGGAAGTGACGGAGGGGAAGCTGGCGATTATCACACTGAGAGCCGTCAG
AATGAGGATGAAACTAGTGTTGCTAAGCATCTGGAATCTGCAAATACCATGTTTTCTTTC
ATTTGGTGGATAATTGGGTTCTATTGGATATCCGCTGGTGGCGAAAGTTTGACTCATGAT
GCACCTCAACTTTACTGGCTTTGTCTCACATTTCTAGCATTCGATGTGATCTTTGTTGTT
ATATGTGTTGCCGTGGCTTGTCTCATTGGAATTGCTGTTTGTTGCTGCCTACCGTGTATC
ATTGCTATTTTATATGCAGTGGCGGACCAGGAAGGAGCAACCAAGGAAGATGTTGAGAGG
CTGCCTAAATACAAGTTTCGAAAACTTGGTGATTTTGAAAAACAAAATGGCGAGATTCAA
GAATCATTTGGAGGAGTAATGACTGAATGTGACGCTGATACACCCATTGAGCATGTTCTC
ACATTGGAAGATGCCGAATGTTGCATTTGCCTTTGTCCCTATGAAGATGGAACTGAGCTG
CGTGAGCTCCCTTGTCGTCACCATTTTCACTCTGCCTGCATAGACAAGTGGTTGTTCATA
AATGCCACCTGCCCTCTTTGCAAGTTCAATATTCTTAAAAATGGCAATCAAAGTAGTGGC
GAAGACGCATAA

Peptide Sequence

PEP ID

XP_016478464.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Nicotiana tabacum]
Sequence

MSTARAGNDDSSNRVDTTPLLTDQLFRSRRLARRAPSLRGAARFLRRASSRRMMREPSRR
VREAAAEQIEERQSDWAYSKPIVILDLIWNLAFVIVSVSVLILSLDESPSMPLRLWIVGY
ALQCLLHMVCVCVEYRRRIQLSNPATSLNSEQSSVAGGWNGSSSGSDGGEAGDYHTESRQ
NEDETSVAKHLESANTMFSFIWWIIGFYWISAGGESLTHDAPQLYWLCLTFLAFDVIFVV
ICVAVACLIGIAVCCCLPCIIAILYAVADQEGATKEDVERLPKYKFRKLGDFEKQNGEIQ
ESFGGVMTECDADTPIEHVLTLEDAECCICLCPYEDGTELRELPCRHHFHSACIDKWLFI
NATCPLCKFNILKNGNQSSGEDA

Transcript Sequence

Gene sequence data has not been registered.